Clinical Knowledge Graph¶
This web page contains the documentation for the Clinical Knowledge Graph using Sphinx.
Installation¶
Follow this guide to get the Clinical Knowledge Graph installed. There are two options:
Install each of the requirements
Build the Docker image and run everything (Neo4j, CKG app and Jupyter Hub) into one single container (Recommended)
Getting started¶
Are you new to the Clinical Knowledge Graph? Learn about how to use it and all the possibilities.
Creating a project and getting a report out (default configuration) Getting Started with CKG
Connecting to CKG Graph Database: Connect to DB
Define a different Analysis Pipeline: Configuration
Report Notification: Notifications
CKG Graph Database Builder¶
Building CKG’s Graph Database: Builder
Adding New Resources: Contributing
API Reference¶
Code available in GitHub.
- API Reference